Transcript: ENSMUST00000131966.8 Ccdc81-202

Description

coiled-coil domain containing 81 [Source:MGI Symbol;Acc:MGI:1918134]

Gene Synonyms

4921513D09Rik

Location

Chromosome 7: 89,515,356-89,552,837 reverse strand.

About this transcript

This transcript has 16 exons, is annotated with 1 domain and feature, is associated with 2358 variant alleles and maps to 180 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000039391.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000041195.6	Ccdc81-201	2439	654aa	ENSMUSP00000044087.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS52306	Q9D5W4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000131966.8	Ccdc81-202	2788	194aa	ENSMUSP00000117788.2	Nonsense mediated decay		D6REG7	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 16, Coding exons: 5, Transcript length: 2,788 bps, Translation length: 194 residues

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000131966.8

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSMUST00000131966.8 Ccdc81-202

Summary

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Transcript: ENSMUST00000131966.8 Ccdc81-202

Summary

About Us

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