Transcript: ENSMUST00000131954.2 Morc2b-202

Description

microrchidia 2B [Source:MGI Symbol;Acc:MGI:3045293]

Gene Synonyms

4932411A10Rik

Location

Chromosome 17: 33,354,617-33,358,473 reverse strand.

About this transcript

This transcript has 1 exon, is annotated with 16 domains and features, is associated with 658 variant alleles and maps to 103 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000048602.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000131954.2	Morc2b-202	3857	1022aa	ENSMUSP00000123354.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS37561	Q8C5W4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENSMUST00000053896.8	Morc2b-201	3712	1022aa	ENSMUSP00000056879.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS37561	Q8C5W4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000234062.2	Morc2b-203	1036	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 3,857 bps, Translation length: 1,022 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8C5W4

CCDS

This transcript is a member of the Mouse CCDS set: CCDS37561

Transcript Support Level (TSL)

TSL:NA

Version

ENSMUST00000131954.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000131954.2 Morc2b-202

Summary

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Transcript: ENSMUST00000131954.2 Morc2b-202

Summary

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