Transcript: ENSMUST00000131845.2 Hnf1aos1-203

Description

HNF1 homeobox A, opposite strand 1 [Source:MGI Symbol;Acc:MGI:3652225]

Gene Synonyms

Gm13824, Haster

Location

Chromosome 5: 115,107,956-115,123,886 forward strand.

About this transcript

This transcript has 6 exons, is associated with 1672 variant alleles and maps to 47 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000086054.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000245580.1	Hnf1aos1-204	1081	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000131845.2	Hnf1aos1-203	740	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000129609.2	Hnf1aos1-202	516	No protein	-	lncRNA	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000125010.4	Hnf1aos1-201	437	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 740 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENSMUST00000131845.2

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSMUST00000131845.2 Hnf1aos1-203

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSMUST00000131845.2 Hnf1aos1-203

Summary

About Us

Get help

Our sister sites

Follow us