Mouse (GRCm39)
Description

lysine (K)-specific demethylase 1A [Source:MGI Symbol;Acc:MGI:1196256]

Gene Synonyms

1810043O07Rik, Aof2, Kdm1, LSD1

About this transcript

This transcript has 19 exons, is annotated with 24 domains and features, is associated with 2917 variant alleles and maps to 282 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000105847.8Kdm1a-2023028873aaENSMUSP00000101473.2
 
Protein coding
CCDS84806A3KG93 Ensembl CanonicalGENCODE basicAPPRIS ALT1TSL:5
ENSMUST00000116273.9Kdm1a-2033008853aaENSMUSP00000111977.3
 
Protein coding
CCDS51331Q6ZQ88 GENCODE basicAPPRIS P4TSL:1
ENSMUST00000046846.14Kdm1a-2012051683aaENSMUSP00000035457.8
 
Protein coding
G8JL40 TSL:5CDS 5' incomplete
ENSMUST00000170979.2Kdm1a-208965322aaENSMUSP00000131385.2
 
Protein coding
F6Z4I3 TSL:5CDS 5' and 3' incomplete
ENSMUST00000155354.8Kdm1a-207751250aaENSMUSP00000114268.2
 
Protein coding
F6ZC60 TSL:3CDS 5' and 3' incomplete
ENSMUST00000125111.2Kdm1a-2041130No protein-
 
Retained intron
-TSL:3
ENSMUST00000147886.2Kdm1a-206995No protein-
 
Retained intron
-TSL:2
ENSMUST00000139690.2Kdm1a-205858No protein-
 
Retained intron
-TSL:3
ENSMUST00000171424.2Kdm1a-209828No protein-
 
Retained intron
-TSL:2
Statistics

Exons: 19, Coding exons: 19, Transcript length: 3,008 bps, Translation length: 853 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6ZQ88

CCDS

This transcript is a member of the Mouse CCDS set: CCDS51331

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000116273.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.