Transcript: ENSMUST00000110901.2 Spred1-202

Description

sprouty protein with EVH-1 domain 1, related sequence [Source:MGI Symbol;Acc:MGI:2150016]

Gene Synonyms

5730461F13Rik, Spred-1

Location

Chromosome 2: 116,952,119-117,003,335 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 8 domains and features, is associated with 2555 variant alleles and maps to 91 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000027351.15 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000028829.13	Spred1-201	6016	444aa	ENSMUSP00000028829.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS16570	Q924S8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000110901.2	Spred1-202	1440	229aa	ENSMUSP00000106526.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS71115	Q924S8-2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,440 bps, Translation length: 229 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q924S8

CCDS

This transcript is a member of the Mouse CCDS set: CCDS71115

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000110901.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000110901.2 Spred1-202

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSMUST00000110901.2 Spred1-202

Summary

About Us

Get help

Our sister sites

Follow us