Transcript: ENSMUST00000110704.9 Akr1c18-202

Description

aldo-keto reductase family 1, member C18 [Source:MGI Symbol;Acc:MGI:2145420]

Gene Synonyms

20alpha-HSD, 20alpha-hydroxysteroid dehydrogenase

Location

Chromosome 13: 4,182,614-4,200,627 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 13 domains and features, is associated with 1245 variant alleles and maps to 153 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000021214.15 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000021635.9	Akr1c18-201	1200	323aa	ENSMUSP00000021635.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS26219	Q3U538 Q8K023	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000110704.9	Akr1c18-202	1103	297aa	ENSMUSP00000106332.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS84006	Q8K023-2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,103 bps, Translation length: 297 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8K023

CCDS

This transcript is a member of the Mouse CCDS set: CCDS84006

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000110704.9

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000110704.9 Akr1c18-202

Summary

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Transcript: ENSMUST00000110704.9 Akr1c18-202

Summary

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