Transcript: ENSMUST00000107363.3 Kcnh4-202

Description

potassium voltage-gated channel, subfamily H (eag-related), member 4 [Source:MGI Symbol;Acc:MGI:2156184]

Gene Synonyms

BEC2

Location

Chromosome 11: 100,631,208-100,650,768 reverse strand.

About this transcript

This transcript has 17 exons, is annotated with 56 domains and features, is associated with 1467 variant alleles and maps to 184 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000035355.16 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000107363.3	Kcnh4-202	3948	1018aa	ENSMUSP00000102986.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS36334	A2A5F7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000107361.9	Kcnh4-201	3748	1018aa	ENSMUSP00000102984.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS36334	A2A5F7	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 17, Coding exons: 16, Transcript length: 3,948 bps, Translation length: 1,018 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS36334

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000107363.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

dotter confirmed [Definitions]

not organism-supported

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000107363.3 Kcnh4-202

Summary

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Transcript: ENSMUST00000107363.3 Kcnh4-202

Summary

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