Transcript: ENSMUST00000107197.2 Gm128-202

Description

predicted gene 128 [Source:MGI Symbol;Acc:MGI:2684974]

Gene Synonyms

LOC229588, Ment, Pmis1

Location

Chromosome 3: 95,144,418-95,148,909 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 11 domains and features, is associated with 629 variant alleles and maps to 167 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000068860.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000090815.6	Gm128-201	1959	350aa	ENSMUSP00000088324.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS17608	G9MDF2 Q569E4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000107197.2	Gm128-202	1289	189aa	ENSMUSP00000102815.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D3YUZ7	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,289 bps, Translation length: 189 residues

Transcript Support Level (TSL)

TSL:2

Version

ENSMUST00000107197.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000107197.2 Gm128-202

Summary

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Transcript: ENSMUST00000107197.2 Gm128-202

Summary

About Us

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