Transcript: ENSMUST00000100937.5 4930522L14Rik-201

Description

RIKEN cDNA 4930522L14 gene [Source:MGI Symbol;Acc:MGI:1925270]

Gene Synonyms

Gm42152

Location

Chromosome 5: 109,885,574-109,899,752 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 8 domains and features, is associated with 2063 variant alleles and maps to 129 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000072762.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000112547.9	4930522L14Rik-202	2096	666aa	ENSMUSP00000108166.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9QAG4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000100937.5	4930522L14Rik-201	1722	64aa	ENSMUSP00000098497.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8C1G8	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,722 bps, Translation length: 64 residues

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000100937.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000100937.5 4930522L14Rik-201

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSMUST00000100937.5 4930522L14Rik-201

Summary

About Us

Get help

Our sister sites

Follow us