Transcript: ENSMUST00000091299.8 Cdk7-201

Description

cyclin dependent kinase 7 [Source:MGI Symbol;Acc:MGI:102956]

Gene Synonyms

CRK4 PK (CDC2-related-kinase-4 protein kinase), Cdkn7, Crk4

Location

Chromosome 13: 100,839,139-100,867,447 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 11 domains and features, is associated with 2187 variant alleles and maps to 326 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000069089.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000091299.8	Cdk7-201	1988	346aa	ENSMUSP00000088845.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS36766	Q03147 Q3THG5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000225990.2	Cdk7-205	1159	309aa	ENSMUSP00000153369.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A286YDC0	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000225056.2	Cdk7-202	1595	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000225578.2	Cdk7-203	763	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000225946.2	Cdk7-204	681	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 1,988 bps, Translation length: 346 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q03147

CCDS

This transcript is a member of the Mouse CCDS set: CCDS36766

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000091299.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000091299.8 Cdk7-201

Summary

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Transcript: ENSMUST00000091299.8 Cdk7-201

Summary

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