Transcript: ENSMUST00000089174.6 Ccdc134-201

Description

coiled-coil domain containing 134 [Source:MGI Symbol;Acc:MGI:1923707]

Gene Synonyms

2310042L06Rik

Location

Chromosome 15: 82,012,123-82,026,404 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 8 domains and features, is associated with 1174 variant alleles and maps to 196 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000068114.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000089174.6	Ccdc134-201	2046	229aa	ENSMUSP00000086578.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS37155	Q8C7V8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000229411.2	Ccdc134-203	1854	110aa	ENSMUSP00000155805.2	Nonsense mediated decay		A0A2R8VI68	-
ENSMUST00000229384.2	Ccdc134-202	807	42aa	ENSMUSP00000155080.2	Nonsense mediated decay		A0A2R8VJZ8	-
ENSMUST00000229597.2	Ccdc134-205	745	107aa	ENSMUSP00000155776.2	Nonsense mediated decay		A0A2R8VKP7	-
ENSMUST00000229788.2	Ccdc134-206	368	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000229456.2	Ccdc134-204	4919	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000230582.2	Ccdc134-207	536	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 2,046 bps, Translation length: 229 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8C7V8

CCDS

This transcript is a member of the Mouse CCDS set: CCDS37155

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000089174.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000089174.6 Ccdc134-201

Summary

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Transcript: ENSMUST00000089174.6 Ccdc134-201

Summary

About Us

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