Mouse (GRCm39)
Description

polymerase (RNA) I polypeptide C [Source:MGI Symbol;Acc:MGI:103288]

Gene Synonyms

40kDa, RPA40, Rpo1-1

Location
About this transcript

This transcript has 9 exons, is annotated with 12 domains and features, is associated with 718 variant alleles and maps to 275 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000087026.13Polr1c-2011314346aaENSMUSP00000084252.7
 
Protein coding
CCDS37632P52432 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000124655.8Polr1c-203829260aaENSMUSP00000122026.2
 
Protein coding
D3Z3D6 GENCODE basicTSL:5
ENSMUST00000142706.9Polr1c-204771255aaENSMUSP00000116998.3
 
Protein coding
D3Z7Q8 TSL:5CDS 3' incomplete
ENSMUST00000173349.8Polr1c-207516170aaENSMUSP00000133861.2
 
Protein coding
G3UXX5 TSL:3CDS 3' incomplete
ENSMUST00000173232.2Polr1c-206432103aaENSMUSP00000133597.2
 
Nonsense mediated decay
G3UX92 TSL:5
ENSMUST00000152583.8Polr1c-205870No protein-
 
Retained intron
-TSL:3
ENSMUST00000174392.2Polr1c-208740No protein-
 
Retained intron
-TSL:2
ENSMUST00000124126.2Polr1c-202576No protein-
 
Retained intron
-TSL:2
Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,314 bps, Translation length: 346 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P52432

CCDS

This transcript is a member of the Mouse CCDS set: CCDS37632

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000087026.13

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.