Transcript: ENSMUST00000078095.11 Gucy2c-202

Description

guanylate cyclase 2c [Source:MGI Symbol;Acc:MGI:106903]

Gene Synonyms

GC-C

Location

Chromosome 6: 136,674,283-136,758,740 reverse strand.

About this transcript

This transcript has 26 exons, is annotated with 20 domains and features, is associated with 6776 variant alleles and maps to 288 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000042638.15 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000032338.10	Gucy2c-201	3959	1072aa	ENSMUSP00000032338.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS51941	Q3UWA6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000078095.11	Gucy2c-202	3863	1048aa	ENSMUSP00000077236.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS20653	Q3UWA6-2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 26, Coding exons: 26, Transcript length: 3,863 bps, Translation length: 1,048 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q3UWA6

CCDS

This transcript is a member of the Mouse CCDS set: CCDS20653

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000078095.11

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000078095.11 Gucy2c-202

Summary

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Transcript: ENSMUST00000078095.11 Gucy2c-202

Summary

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