Mouse (GRCm39)
Description

retinoid X receptor alpha [Source:MGI Symbol;Acc:MGI:98214]

Gene Synonyms

9530071D11Rik, RXR alpha 1, RXRalpha1

Location
About this transcript

This transcript has 10 exons, is annotated with 46 domains and features, is associated with 3772 variant alleles and maps to 376 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000238913.2Rxra-2071631497aaENSMUSP00000159198.2
 
Protein coding
A0A5F8MQ23 Ensembl CanonicalGENCODE basic
ENSMUST00000077257.12Rxra-2014905467aaENSMUSP00000076491.6
 
Protein coding
CCDS15830A2AJP1 P28700 GENCODE basicAPPRIS P3TSL:1
ENSMUST00000113934.2Rxra-2031989439aaENSMUSP00000109567.2
 
Protein coding
CCDS71011Q6LC96 GENCODE basicAPPRIS ALT1TSL:1
ENSMUST00000100251.9Rxra-2021952439aaENSMUSP00000097822.3
 
Protein coding
CCDS71011Q6LC96 GENCODE basicAPPRIS ALT1TSL:1
ENSMUST00000238859.2Rxra-2061609322aaENSMUSP00000158864.2
 
Protein coding
A0A5F8MP91 CDS 3' incomplete
ENSMUST00000129514.8Rxra-204628165aaENSMUSP00000115165.2
 
Protein coding
A2AJP2 TSL:5CDS 3' incomplete
ENSMUST00000148756.2Rxra-205673No protein-
 
Protein coding CDS not defined
-TSL:5
Statistics

Exons: 10, Coding exons: 10, Transcript length: 4,905 bps, Translation length: 467 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P28700

CCDS

This transcript is a member of the Mouse CCDS set: CCDS15830

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000077257.12

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.