Transcript: ENSMUST00000073456.9 Nsa2-201

Description

NSA2 ribosome biogenesis homolog [Source:MGI Symbol;Acc:MGI:1913883]

Gene Synonyms

5730427N09Rik, LNR42, Nsa2p, Yr29

Location

Chromosome 13: 97,265,932-97,274,445 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 8 domains and features, is associated with 1021 variant alleles and maps to 446 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000060739.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000073456.9	Nsa2-201	2700	260aa	ENSMUSP00000073161.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS36756	Q9CR47	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000225410.2	Nsa2-203	974	233aa	ENSMUSP00000153113.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A286YCS8	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000224980.2	Nsa2-202	2106	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 2,700 bps, Translation length: 260 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9CR47

CCDS

This transcript is a member of the Mouse CCDS set: CCDS36756

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000073456.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000073456.9 Nsa2-201

Summary

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Transcript: ENSMUST00000073456.9 Nsa2-201

Summary

About Us

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