Transcript: ENSMUST00000066437.5 Fam216b-201

Description

family with sequence similarity 216, member B [Source:MGI Symbol;Acc:MGI:2145738]

Gene Synonyms

AU021034

Location

Chromosome 14: 78,318,461-78,326,447 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 3 domains and features, is associated with 939 variant alleles and maps to 119 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000045655.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000066437.5	Fam216b-201	2241	138aa	ENSMUSP00000064524.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS27293	Q8CC14	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000118785.3	Fam216b-202	1447	97aa	ENSMUSP00000113562.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D3Z583	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000173826.2	Fam216b-203	575	72aa	ENSMUSP00000134482.2	Nonsense mediated decay		G3UZG0	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 2,241 bps, Translation length: 138 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8CC14

CCDS

This transcript is a member of the Mouse CCDS set: CCDS27293

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000066437.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000066437.5 Fam216b-201

Summary

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Transcript: ENSMUST00000066437.5 Fam216b-201

Summary

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