Transcript: ENSMUST00000063031.4 Or6c38-201

Description

olfactory receptor family 6 subfamily C member 38 [Source:MGI Symbol;Acc:MGI:3030602]

Gene Synonyms

GA_x6K02T2PULF-10779441-10778503, MOR114-4, Olfr768

Location

Chromosome 10: 128,928,903-128,929,841 reverse strand.

About this transcript

This transcript has 1 exon, is annotated with 25 domains and features, is associated with 489 variant alleles and maps to 80 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000050198.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000063031.4	Or6c38-201	939	312aa	ENSMUSP00000089619.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS24305	Q8VGC4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENSMUST00000216681.2	Or6c38-203	4555	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000216212.2	Or6c38-202	3892	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 939 bps, Translation length: 312 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS24305

Transcript Support Level (TSL)

TSL:NA

Version

ENSMUST00000063031.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000063031.4 Or6c38-201

Summary

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Transcript: ENSMUST00000063031.4 Or6c38-201

Summary

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