Transcript: ENSMUST00000058362.5 Vmn1r68-201

Description

vomeronasal 1 receptor 68 [Source:MGI Symbol;Acc:MGI:3648262]

Gene Synonyms

Gm6898

Location

Chromosome 7: 10,261,137-10,262,096 reverse strand.

About this transcript

This transcript has 1 exon, is annotated with 18 domains and features, is associated with 487 variant alleles and maps to 26 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000047031.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000236246.2	Vmn1r68-203	7024	319aa	ENSMUSP00000157627.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS52009	E9Q0V3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000058362.5	Vmn1r68-201	960	319aa	ENSMUSP00000050927.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS52009	E9Q0V3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENSMUST00000238012.2	Vmn1r68-205	5319	319aa	ENSMUSP00000157911.2	Nonsense mediated decay	CCDS52009	E9Q0V3	-
ENSMUST00000238003.2	Vmn1r68-204	4622	319aa	ENSMUSP00000157653.2	Nonsense mediated decay	CCDS52009	E9Q0V3	-
ENSMUST00000235324.2	Vmn1r68-202	3379	269aa	ENSMUSP00000158011.2	Nonsense mediated decay		A0A494BAG0	-

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 960 bps, Translation length: 319 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS52009

Transcript Support Level (TSL)

TSL:NA

Version

ENSMUST00000058362.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000058362.5 Vmn1r68-201

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Transcript: ENSMUST00000058362.5 Vmn1r68-201

Summary

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