Transcript: ENSMUST00000057488.15 Cd200r1-201

Description

CD200 receptor 1 [Source:MGI Symbol;Acc:MGI:1889024]

Gene Synonyms

CD200R, Mox2r, OX2R

Location

Chromosome 16: 44,586,099-44,615,341 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 17 domains and features, is associated with 2403 variant alleles and maps to 197 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000022667.19 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000057488.15	Cd200r1-201	1892	326aa	ENSMUSP00000053822.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS28189	Q9ES57	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000231633.2	Cd200r1-203	2768	40aa	ENSMUSP00000155927.2	Nonsense mediated decay		A0A338P6B8	-
ENSMUST00000134625.2	Cd200r1-202	1310	245aa	ENSMUSP00000138076.2	Nonsense mediated decay		M0QWY6	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,892 bps, Translation length: 326 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9ES57

CCDS

This transcript is a member of the Mouse CCDS set: CCDS28189

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000057488.15

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000057488.15 Cd200r1-201

Summary

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Transcript: ENSMUST00000057488.15 Cd200r1-201

Summary

About Us

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