Transcript: ENSMUST00000053413.12 Cdk5r1-201

Description

cyclin dependent kinase 5, regulatory subunit 1 (p35) [Source:MGI Symbol;Acc:MGI:101764]

Gene Synonyms

D11Bwg0379e, p25, p35

Location

Chromosome 11: 80,367,849-80,372,010 forward strand.

About this transcript

This transcript has 1 exon, is annotated with 10 domains and features, is associated with 568 variant alleles and maps to 397 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000048895.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000053413.12	Cdk5r1-201	4162	307aa	ENSMUSP00000099514.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS25134	P61809 Q542T9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENSMUST00000147694.2	Cdk5r1-202	659	138aa	ENSMUSP00000120964.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AQH0	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 4,162 bps, Translation length: 307 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P61809

CCDS

This transcript is a member of the Mouse CCDS set: CCDS25134

Transcript Support Level (TSL)

TSL:NA

Version

ENSMUST00000053413.12

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000053413.12 Cdk5r1-201

Summary

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Transcript: ENSMUST00000053413.12 Cdk5r1-201

Summary

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