Transcript: ENSMUST00000050306.8 1700056E22Rik-201

Description

RIKEN cDNA 1700056E22 gene [Source:MGI Symbol;Acc:MGI:1920613]

Location

Chromosome 1: 183,765,229-183,766,195 reverse strand.

About this transcript

This transcript has 1 exon, is annotated with 5 domains and features, is associated with 437 variant alleles and maps to 99 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000044854.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000050306.8	1700056E22Rik-201	967	234aa	ENSMUSP00000055787.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56665	F7CNM6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENSMUST00000193919.2	1700056E22Rik-202	1272	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 967 bps, Translation length: 234 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS56665

Transcript Support Level (TSL)

TSL:NA

Version

ENSMUST00000050306.8

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000050306.8 1700056E22Rik-201

Summary

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Transcript: ENSMUST00000050306.8 1700056E22Rik-201

Summary

About Us

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