Transcript: ENSMUST00000047275.8 Bace2-201

Description

beta-site APP-cleaving enzyme 2 [Source:MGI Symbol;Acc:MGI:1860440]

Gene Synonyms

1110059C24Rik, ALP56, ARP1, ASP21, BAE2, CDA13, CEAP1

Location

Chromosome 16: 97,157,942-97,244,136 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 30 domains and features, is associated with 3652 variant alleles and maps to 357 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000040605.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000047275.8	Bace2-201	7646	514aa	ENSMUSP00000043918.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS28359	A0A0R4J0I8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000231892.2	Bace2-204	271	53aa	ENSMUSP00000155906.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A338P6C9	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSMUST00000231664.2	Bace2-202	806	118aa	ENSMUSP00000156270.2	Nonsense mediated decay		A0A338P773	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSMUST00000231783.2	Bace2-203	746	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 7,646 bps, Translation length: 514 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS28359

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000047275.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

3' standard supported extension [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000047275.8 Bace2-201

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Transcript: ENSMUST00000047275.8 Bace2-201

Summary

About Us

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