Mouse (GRCm39)
Description

pogo transposable element with ZNF domain [Source:MGI Symbol;Acc:MGI:2442117]

Gene Synonyms

9530006B08Rik

Location
About this transcript

This transcript has 19 exons, is annotated with 45 domains and features, is associated with 2375 variant alleles and maps to 258 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000249403.1Pogz-21163991425aaENSMUSP00000159753.1
 
Protein coding
-Ensembl CanonicalGENCODE basic
ENSMUST00000107270.9Pogz-20563991409aaENSMUSP00000102891.3
 
Protein coding
CCDS17596B9EIG6 Q8BZH4 GENCODE basicAPPRIS P4TSL:1
ENSMUST00000107269.2Pogz-20459661314aaENSMUSP00000102890.2
 
Protein coding
D3YUW8 GENCODE basicTSL:5
ENSMUST00000042402.12Pogz-20147751400aaENSMUSP00000037523.6
 
Protein coding
CCDS50985Q0VGT3 GENCODE basicAPPRIS ALT1TSL:1
ENSMUST00000107266.8Pogz-20341001356aaENSMUSP00000102887.2
 
Protein coding
D3YUX1 GENCODE basicTSL:5
ENSMUST00000140397.2Pogz-20951754aaENSMUSP00000122492.2
 
Nonsense mediated decay
F7D0L1 TSL:5CDS 5' incomplete
ENSMUST00000107265.8Pogz-202742No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000125638.2Pogz-206279No protein-
 
Protein coding CDS not defined
-TSL:5
ENSMUST00000126235.8Pogz-2072933No protein-
 
Retained intron
-TSL:1
ENSMUST00000142253.2Pogz-210777No protein-
 
Retained intron
-TSL:2
ENSMUST00000132544.2Pogz-208744No protein-
 
Retained intron
-TSL:3
Statistics

Exons: 19, Coding exons: 18, Transcript length: 4,775 bps, Translation length: 1,400 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS50985

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000042402.12

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.