Transcript: ENSMUST00000041733.9 Taf2-201

Description

TATA-box binding protein associated factor 2 [Source:MGI Symbol;Acc:MGI:2443028]

Gene Synonyms

150kDa, 4732460C16Rik, CIF150, TAF2B, TAFII150

Location

Chromosome 15: 54,878,527-54,935,548 reverse strand.

About this transcript

This transcript has 26 exons, is annotated with 15 domains and features, is associated with 3459 variant alleles and maps to 321 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000037343.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000041733.9	Taf2-201	5031	1198aa	ENSMUSP00000043733.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS37075	B9EJX5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000228345.2	Taf2-204	1039	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000228896.2	Taf2-206	440	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000226864.2	Taf2-202	2713	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000228360.2	Taf2-205	1095	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000227254.2	Taf2-203	690	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 26, Coding exons: 26, Transcript length: 5,031 bps, Translation length: 1,198 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS37075

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000041733.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000041733.9 Taf2-201

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Transcript: ENSMUST00000041733.9 Taf2-201

Summary

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