Transcript: ENSMUST00000040624.7 Bicral-201

Description

BRD4 interacting chromatin remodeling complex associated protein like [Source:MGI Symbol;Acc:MGI:2673855]

Gene Synonyms

BC032203, Gltscr1l

Location

Chromosome 17: 47,109,046-47,142,339 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 16 domains and features, is associated with 2537 variant alleles and maps to 292 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000036568.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000040624.7	Bicral-201	6575	1074aa	ENSMUSP00000044833.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS50126	B2RX81 Q8CHH5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000233537.2	Bicral-204	3685	1074aa	ENSMUSP00000156590.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS50126	B2RX81 Q8CHH5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000233455.2	Bicral-203	540	162aa	ENSMUSP00000156681.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A3B2W406	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000233142.2	Bicral-202	566	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 6,575 bps, Translation length: 1,074 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8CHH5

CCDS

This transcript is a member of the Mouse CCDS set: CCDS50126

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000040624.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000040624.7 Bicral-201

Summary

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Transcript: ENSMUST00000040624.7 Bicral-201

Summary

About Us

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