Mouse (GRCm39)
Description

protein tyrosine phosphatase domain containing 1 [Source:MGI Symbol;Acc:MGI:2145430]

Location
About this transcript

This transcript has 10 exons, is annotated with 17 domains and features, is associated with 2696 variant alleles and maps to 296 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000222028.2Ptpdc1-2033164808aaENSMUSP00000152771.2
 
Protein coding
Q6NZK8-3 Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
ENSMUST00000035824.11Ptpdc1-2014402747aaENSMUSP00000047374.10
 
Protein coding
CCDS26495Q6NZK8 GENCODE basicAPPRIS ALT2TSL:1
ENSMUST00000238995.2Ptpdc1-2052962795aaENSMUSP00000158961.2
 
Protein coding
A0A5F8MPG6 GENCODE basicAPPRIS ALT2
ENSMUST00000223025.2Ptpdc1-204187392aaENSMUSP00000152409.2
 
Nonsense mediated decay
A0A1Y7VLX3 TSL:1
ENSMUST00000221887.2Ptpdc1-2021072No protein-
 
Retained intron
-TSL:1
Statistics

Exons: 10, Coding exons: 9, Transcript length: 4,402 bps, Translation length: 747 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6NZK8

CCDS

This transcript is a member of the Mouse CCDS set: CCDS26495

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000035824.11

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.