Transcript: ENSMUST00000035242.9 Rab24-201

Description

RAB24, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:105065]

Gene Synonyms

6530406O07Rik

Location

Chromosome 13: 55,467,698-55,469,758 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 20 domains and features, is associated with 483 variant alleles and maps to 228 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000034789.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000035242.9	Rab24-201	1168	203aa	ENSMUSP00000046188.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS26541	P35290 Q0PD31	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000224685.2	Rab24-203	454	116aa	ENSMUSP00000153246.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A286YD30	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSMUST00000225289.2	Rab24-205	1806	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000224936.2	Rab24-204	1592	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000223672.2	Rab24-202	730	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,168 bps, Translation length: 203 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P35290

CCDS

This transcript is a member of the Mouse CCDS set: CCDS26541

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000035242.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000035242.9 Rab24-201

Summary

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Transcript: ENSMUST00000035242.9 Rab24-201

Summary

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