Transcript: ENSMUST00000032820.15 Zscan26-201

Description

zinc finger and SCAN domain containing 26 [Source:MGI Symbol;Acc:MGI:3531417]

Gene Synonyms

Zfp187

Location

Chromosome 13: 21,626,350-21,637,830 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 43 domains and features, is associated with 990 variant alleles and maps to 190 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000022228.15 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000110485.3	Zscan26-202	4366	466aa	ENSMUSP00000106111.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS84009	Q5RJ54	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000032820.15	Zscan26-201	3918	340aa	ENSMUSP00000032820.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS49211	F8WJ31	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 3,918 bps, Translation length: 340 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS49211

Transcript Support Level (TSL)

TSL:3

Version

ENSMUST00000032820.15

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000032820.15 Zscan26-201

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSMUST00000032820.15 Zscan26-201

Summary

About Us

Get help

Our sister sites

Follow us