Transcript: ENSMUST00000032106.6 1700003E16Rik-201

Description

RIKEN cDNA 1700003E16 gene [Source:MGI Symbol;Acc:MGI:1919087]

Location

Chromosome 6: 83,133,386-83,139,927 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 11 domains and features, is associated with 752 variant alleles and maps to 138 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000030030.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000032106.6	1700003E16Rik-201	2020	598aa	ENSMUSP00000032106.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS51818	Q9DAQ4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000203203.2	1700003E16Rik-202	2070	113aa	ENSMUSP00000145406.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A0N4SW77	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 2,020 bps, Translation length: 598 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9DAQ4

CCDS

This transcript is a member of the Mouse CCDS set: CCDS51818

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000032106.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

inferred transcript model [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000032106.6 1700003E16Rik-201

Summary

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Transcript: ENSMUST00000032106.6 1700003E16Rik-201

Summary

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