Mouse (GRCm39)
Description

syntaxin 6 [Source:MGI Symbol;Acc:MGI:1926235]

Gene Synonyms

2310039E05Rik, 2410005I16Rik

About this transcript

This transcript has 8 exons, is annotated with 18 domains and features, is associated with 2674 variant alleles and maps to 388 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000027743.13Stx6-2014589255aaENSMUSP00000027743.8
 
Protein coding
CCDS35741Q9JKK1 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000192690.2Stx6-206128991aaENSMUSP00000141362.2
 
Protein coding
A0A0A6YW23 TSL:1CDS 5' incomplete
ENSMUST00000195302.6Stx6-209955255aaENSMUSP00000142089.2
 
Protein coding
Q9JKK1-2 GENCODE basicTSL:1
ENSMUST00000193059.6Stx6-207934199aaENSMUSP00000141976.2
 
Nonsense mediated decay
A0A0A6YXG0 TSL:5
ENSMUST00000192519.6Stx6-205750No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000194158.2Stx6-208711No protein-
 
Protein coding CDS not defined
-TSL:2
ENSMUST00000192091.2Stx6-2034029No protein-
 
Retained intron
-TSL:NA
ENSMUST00000195693.6Stx6-210870No protein-
 
Retained intron
-TSL:2
ENSMUST00000192311.2Stx6-204685No protein-
 
Retained intron
-TSL:5
ENSMUST00000191769.2Stx6-202405No protein-
 
Retained intron
-TSL:2
Statistics

Exons: 8, Coding exons: 8, Transcript length: 4,589 bps, Translation length: 255 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9JKK1

CCDS

This transcript is a member of the Mouse CCDS set: CCDS35741

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000027743.13

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.