Transcript: ENSMUST00000026159.6 Cd7-201

Description

CD7 antigen [Source:MGI Symbol;Acc:MGI:88344]

Location

Chromosome 11: 120,927,573-120,930,244 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 11 domains and features, is associated with 651 variant alleles and maps to 185 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000025163.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000026159.6	Cd7-201	982	210aa	ENSMUSP00000026159.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS25764	P50283 Q3U4A8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000163465.2	Cd7-202	592	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 982 bps, Translation length: 210 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P50283

CCDS

This transcript is a member of the Mouse CCDS set: CCDS25764

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000026159.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000026159.6 Cd7-201

Summary

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Transcript: ENSMUST00000026159.6 Cd7-201

Summary

About Us

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