Transcript: ENSMUST00000025836.6 Mrpl11-201

Description

mitochondrial ribosomal protein L11 [Source:MGI Symbol;Acc:MGI:2137215]

Gene Synonyms

2410001P07Rik

Location

Chromosome 19: 5,012,175-5,017,027 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 14 domains and features, is associated with 827 variant alleles and maps to 227 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000024902.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000025836.6	Mrpl11-201	3045	192aa	ENSMUSP00000025836.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS29444	Q9CQF0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000236917.2	Mrpl11-204	813	158aa	ENSMUSP00000157720.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A494B9R3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000237974.2	Mrpl11-205	513	150aa	ENSMUSP00000157652.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A494B9H5	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000235229.2	Mrpl11-202	363	114aa	ENSMUSP00000157440.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A494B915	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000236354.2	Mrpl11-203	687	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 3,045 bps, Translation length: 192 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9CQF0

CCDS

This transcript is a member of the Mouse CCDS set: CCDS29444

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000025836.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000025836.6 Mrpl11-201

Summary

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Transcript: ENSMUST00000025836.6 Mrpl11-201

Summary

About Us

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