Transcript: ENSMUST00000024873.7 Yipf4-201

Description

Yip1 domain family, member 4 [Source:MGI Symbol;Acc:MGI:1915114]

Gene Synonyms

2310034L04Rik

Location

Chromosome 17: 74,796,488-74,807,272 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 12 domains and features, is associated with 1457 variant alleles and maps to 252 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000024072.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000024873.7	Yipf4-201	2133	246aa	ENSMUSP00000024873.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS28971	Q8C407	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000234432.2	Yipf4-202	1991	39aa	ENSMUSP00000157350.2	Nonsense mediated decay		A0A3Q4L376	-
ENSMUST00000234448.2	Yipf4-203	1082	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000234939.2	Yipf4-205	481	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000235064.2	Yipf4-206	343	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000234853.2	Yipf4-204	166	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 2,133 bps, Translation length: 246 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8C407

CCDS

This transcript is a member of the Mouse CCDS set: CCDS28971

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000024873.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000024873.7 Yipf4-201

Summary

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Transcript: ENSMUST00000024873.7 Yipf4-201

Summary

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