Transcript: ENSMUST00000023353.4 Mcm4-201

Description

minichromosome maintenance complex component 4 [Source:MGI Symbol;Acc:MGI:103199]

Gene Synonyms

19G, Cdc21, Mcmd4, mCdc21

Location

Chromosome 16: 15,441,761-15,455,264 reverse strand.

About this transcript

This transcript has 16 exons, is annotated with 33 domains and features, is associated with 1287 variant alleles and maps to 342 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000022673.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000023353.4	Mcm4-201	3589	862aa	ENSMUSP00000023353.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS27977	P49717 Q542F4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000230437.2	Mcm4-203	658	220aa	ENSMUSP00000155284.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2R8VHP7	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSMUST00000229606.2	Mcm4-202	423	86aa	ENSMUSP00000155603.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2R8VKJ4	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 3,589 bps, Translation length: 862 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P49717

CCDS

This transcript is a member of the Mouse CCDS set: CCDS27977

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000023353.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000023353.4 Mcm4-201

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSMUST00000023353.4 Mcm4-201

Summary

About Us

Get help

Our sister sites

Follow us