Mouse (GRCm39)
Description

nectin cell adhesion molecule 3 [Source:MGI Symbol;Acc:MGI:1930171]

Gene Synonyms

2610301B19Rik, 3000002N23Rik, 4921513D19Rik, Pvrl3, nectin-3

Location
About this transcript

This transcript has 9 exons, is annotated with 20 domains and features, is associated with 5743 variant alleles and maps to 328 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000023334.15Nectin3-2013062549aaENSMUSP00000023334.9
 
Protein coding
CCDS28206Q9JLB9 Ensembl CanonicalGENCODE basicAPPRIS P3TSL:1
ENSMUST00000023335.13Nectin3-2029116510aaENSMUSP00000023335.7
 
Protein coding
CCDS28204Q9JLB9-2 GENCODE basicAPPRIS ALT1TSL:1
ENSMUST00000096052.9Nectin3-2031746438aaENSMUSP00000093757.3
 
Protein coding
CCDS28205Q9JLB9-3 GENCODE basicTSL:1
ENSMUST00000121245.8Nectin3-205953185aaENSMUSP00000113146.2
 
Protein coding
D3Z6X5 GENCODE basicTSL:3
ENSMUST00000124602.2Nectin3-207911122aaENSMUSP00000115927.2
 
Protein coding
F6UII7 TSL:3CDS 5' incomplete
ENSMUST00000149901.2Nectin3-210732244aaENSMUSP00000117479.2
 
Protein coding
F7A4R2 TSL:3CDS 5' and 3' incomplete
ENSMUST00000121803.8Nectin3-206541100aaENSMUSP00000112567.2
 
Protein coding
D3YWA3 GENCODE basicTSL:2
ENSMUST00000119941.2Nectin3-20452993aaENSMUSP00000113301.2
 
Protein coding
D3Z657 GENCODE basicTSL:3
ENSMUST00000133935.2Nectin3-209737No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000132089.2Nectin3-208752No protein-
 
Retained intron
-TSL:2
Statistics

Exons: 9, Coding exons: 9, Transcript length: 9,116 bps, Translation length: 510 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9JLB9

CCDS

This transcript is a member of the Mouse CCDS set: CCDS28204

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000023335.13

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.