Mouse (GRCm39)
Description

patched 1 [Source:MGI Symbol;Acc:MGI:105373]

Gene Synonyms

A230106A15Rik, Patched 1, Ptc, Ptc1, wig

Location
About this transcript

This transcript has 23 exons, is annotated with 45 domains and features, is associated with 2833 variant alleles and maps to 420 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000021921.11Ptch1-20177251434aaENSMUSP00000021921.6
 
Protein coding
CCDS26592Q61115 Ensembl CanonicalGENCODE basicAPPRIS ALT2TSL:1
ENSMUST00000192155.6Ptch1-20270021297aaENSMUSP00000141489.2
 
Protein coding
A0A0A6YWC4 GENCODE basicAPPRIS P4TSL:5
ENSMUST00000195106.2Ptch1-2051123326aaENSMUSP00000141298.2
 
Protein coding
A0A0A6YVW7 TSL:5CDS 3' incomplete
ENSMUST00000193953.6Ptch1-203849174aaENSMUSP00000142036.2
 
Protein coding
Q5R1U4 TSL:1CDS 3' incomplete
ENSMUST00000195756.6Ptch1-207809174aaENSMUSP00000141990.2
 
Protein coding
Q5R1U4 TSL:1CDS 3' incomplete
ENSMUST00000195258.7Ptch1-20610383456aaENSMUSP00000141309.3
 
Nonsense mediated decay
A0A0A6YVX7 TSL:5CDS 5' incomplete
ENSMUST00000194663.6Ptch1-2047657581aaENSMUSP00000141766.2
 
Nonsense mediated decay
A0A0A6YWZ4 TSL:2
ENSMUST00000222040.2Ptch1-209539No protein-
 
Protein coding CDS not defined
-TSL:5
ENSMUST00000223515.2Ptch1-2102216No protein-
 
Retained intron
-TSL:NA
ENSMUST00000220588.2Ptch1-208349No protein-
 
Retained intron
-TSL:3
Statistics

Exons: 23, Coding exons: 23, Transcript length: 7,725 bps, Translation length: 1,434 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q61115

CCDS

This transcript is a member of the Mouse CCDS set: CCDS26592

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000021921.11

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.