Mouse (GRCm39)
Description

vacuolar protein sorting 13D [Source:MGI Symbol;Acc:MGI:2448530]

About this transcript

This transcript has 68 exons, is annotated with 36 domains and features, is associated with 9984 variant alleles and maps to 774 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000036579.14Vps13d-202158494390aaENSMUSP00000043240.8
 
Protein coding
CCDS71517B1ART2 Ensembl CanonicalGENCODE basicTSL:5
ENSMUST00000020441.13Vps13d-201156654359aaENSMUSP00000020441.7
 
Protein coding
B1ART1 GENCODE basicAPPRIS P1TSL:5
ENSMUST00000185113.2Vps13d-210101763211aaENSMUSP00000138946.2
 
Protein coding
V9GX23 TSL:5CDS 5' incomplete
ENSMUST00000130704.8Vps13d-20361431078aaENSMUSP00000118699.2
 
Nonsense mediated decay
F6XI52 TSL:1CDS 5' incomplete
ENSMUST00000147511.2Vps13d-208802No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000144835.2Vps13d-207689No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000142308.2Vps13d-2064371No protein-
 
Retained intron
-TSL:1
ENSMUST00000141208.8Vps13d-2053811No protein-
 
Retained intron
-TSL:1
ENSMUST00000132700.2Vps13d-2042253No protein-
 
Retained intron
-TSL:1
ENSMUST00000155670.2Vps13d-209358No protein-
 
Retained intron
-TSL:3
Statistics

Exons: 68, Coding exons: 68, Transcript length: 15,665 bps, Translation length: 4,359 residues

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000020441.13

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

not organism-supported [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.