Transcript: ENSMUST00000020343.9 Rab21-201

Description

RAB21, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:894308]

Location

Chromosome 10: 115,122,989-115,151,496 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 21 domains and features, is associated with 2031 variant alleles and maps to 284 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000020132.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000020343.9	Rab21-201	4602	222aa	ENSMUSP00000020343.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS24177	P35282 Q0PD35	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000218831.2	Rab21-202	843	94aa	ENSMUSP00000151464.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A1W2P6Z4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 4,602 bps, Translation length: 222 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P35282

CCDS

This transcript is a member of the Mouse CCDS set: CCDS24177

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000020343.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000020343.9 Rab21-201

Summary

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Transcript: ENSMUST00000020343.9 Rab21-201

Summary

About Us

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