Transcript: ENSMUST00000214314.2 Sema7a-202

Description

sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A [Source:MGI Symbol;Acc:MGI:1306826]

Gene Synonyms

2900057C09Rik, CDw108, Semal, Semaphorin K1

Location

Chromosome 9: 57,847,395-57,862,171 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 1 domain and feature, is associated with 1070 variant alleles and maps to 35 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000038264.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000043059.9	Sema7a-201	3297	664aa	ENSMUSP00000042211.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS23235	Q9QUR8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000214314.2	Sema7a-202	417	86aa	ENSMUSP00000148893.2	Nonsense mediated decay		A0A1L1SQ43	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

Transcript: ENSMUST00000214314.2 Sema7a-202

Protein summary

Protein domains for ENSMUSP00000148893.2

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Transcript: ENSMUST00000214314.2 Sema7a-202

Protein summary

Protein domains for ENSMUSP00000148893.2

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