Summary
Sequence
Protein Information
Genetic Variation
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: ENSMUST00000136938.2 Ubb-202

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Description

ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]

Gene Synonyms

Ubb2

Location

Chromosome 11: 62,442,502-62,443,679 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 26 domains and features, is associated with 559 variant alleles and maps to 391 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000019505.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000019649.4	Ubb-201	1499	305aa	ENSMUSP00000019649.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS24826	P0CG49 Q78XY9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000136938.2	Ubb-202	890	236aa	ENSMUSP00000117361.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5SX22	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Protein summary

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Protein domains for ENSMUSP00000117361.2

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