Transcript: ENSMUST00000112329.3 Pde6c-202

Description

phosphodiesterase 6C, cGMP specific, cone, alpha prime [Source:MGI Symbol;Acc:MGI:105956]

Gene Synonyms

cpfl1

Location

Chromosome 19: 38,121,229-38,172,406 forward strand.

About this transcript

This transcript has 21 exons, is annotated with 28 domains and features, is associated with 3873 variant alleles and maps to 242 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000024992.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000025956.13	Pde6c-201	2586	861aa	ENSMUSP00000025956.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS37971	Q91ZQ1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000112329.3	Pde6c-202	2895	836aa	ENSMUSP00000107948.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS50431	Q91ZQ1-2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Transcript: ENSMUST00000112329.3 Pde6c-202

Protein summary

Protein domains for ENSMUSP00000107948.2

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Transcript: ENSMUST00000112329.3 Pde6c-202

Protein summary

Protein domains for ENSMUSP00000107948.2

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