Transcript: ENSMUST00000034588.9 Apoa1-201

Description

apolipoprotein A-I [Source:MGI Symbol;Acc:MGI:88049]

Gene Synonyms

Alp-1, Apoa-1, Brp-14, Ltw-1, Lvtw-1, Sep-1, Sep-2, Sep2

Location

Chromosome 9: 46,139,878-46,141,764 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 12 domains and features, is associated with 628 variant alleles and maps to 286 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000032083.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000034588.9	Apoa1-201	1035	264aa	ENSMUSP00000034588.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS40610	Q00623	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000132155.2	Apoa1-202	602	122aa	ENSMUSP00000150525.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A1L1STX7	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Transcript: ENSMUST00000034588.9 Apoa1-201

Protein summary

Protein domains for ENSMUSP00000034588.9

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Transcript: ENSMUST00000034588.9 Apoa1-201

Protein summary

Protein domains for ENSMUSP00000034588.9

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