Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Tusc3 ENSMUSG00000118664

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Description

tumor suppressor candidate 3 [Source:MGI Symbol;Acc:MGI:1933134]

Location

Chromosome 8: 39,472,999-39,619,367 forward strand.

GRCm39:CM001001.3

About this gene

This gene has 4 transcripts (splice variants), 203 orthologues, 1 paralogue and is associated with 7 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000239509.1	Tusc3-202	2811	348aa	ENSMUSP00000159387.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A7N9VR83	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSMUST00000239508.1	Tusc3-201	2747	347aa	ENSMUSP00000159386.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8BTV1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSMUST00000239510.1	Tusc3-203	1264	105aa	ENSMUSP00000159388.2	Nonsense mediated decay		Q99J74	-
ENSMUST00000239511.1	Tusc3-204	2667	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

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Summary

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