Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: Vmn1r41 ENSMUSG00000094586

.

Description

vomeronasal 1 receptor 41 [Source:MGI Symbol;Acc:MGI:2148520]

Gene Synonyms

V1rb9

Location

Chromosome 6: 89,717,748-89,724,627 forward strand.

GRCm39:CM000999.3

About this gene

This gene has 6 transcripts (splice variants), 192 orthologues and 237 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000228068.2	Vmn1r41-206	1536	311aa	ENSMUSP00000154326.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS57438	A0A0N4SVQ3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000204949.3	Vmn1r41-201	1378	311aa	ENSMUSP00000145199.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS57438	A0A0N4SVQ3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000226562.2	Vmn1r41-203	1046	81aa	ENSMUSP00000154018.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2I3BQ84	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000227039.2	Vmn1r41-204	985	96aa	ENSMUSP00000154038.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2I3BPT8	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000226337.2	Vmn1r41-202	888	81aa	ENSMUSP00000153965.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2I3BQ84	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000227630.2	Vmn1r41-205	827	96aa	ENSMUSP00000153916.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2I3BPT8	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

.

Summary

.

.