Gene: Patl1 ENSMUSG00000046139

Description

protein associated with topoisomerase II homolog 1 (yeast) [Source:MGI Symbol;Acc:MGI:2147679]

Gene Synonyms

Pat1b

Location

GRCm39:CM001012.3

About this gene

This gene has 2 transcripts (splice variants), 213 orthologues, 1 paralogue and is associated with 14 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000061618.9	Patl1-201	4216	770aa	ENSMUSP00000060398.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS37924	Q3TC46	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000238190.2	Patl1-202	3158	214aa	ENSMUSP00000158282.2	Nonsense mediated decay		A0A494BB25	-

Summary