Gene: Alx4 ENSMUSG00000040310

Description

aristaless-like homeobox 4 [Source:MGI Symbol;Acc:MGI:108359]

Gene Synonyms

Aristaless-like 4

Location

Chromosome 2: 93,472,729-93,511,684 forward strand.

GRCm39:CM000995.3

About this gene

This gene has 2 transcripts (splice variants), 256 orthologues, 47 paralogues and is associated with 29 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000042078.10	Alx4-201	5253	399aa	ENSMUSP00000047962.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS16455	O35137	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000111254.2	Alx4-202	7056	325aa	ENSMUSP00000106885.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2AIK5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Gene: Alx4 ENSMUSG00000040310

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Gene: Alx4 ENSMUSG00000040310

Summary

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