Gene: Galnt18 ENSMUSG00000038296

Description

polypeptide N-acetylgalactosaminyltransferase 18 [Source:MGI Symbol;Acc:MGI:2446239]

Gene Synonyms

2900011G21Rik, Galntl4

Location

Chromosome 7: 111,070,868-111,379,184 reverse strand.

GRCm39:CM001000.3

About this gene

This gene has 2 transcripts (splice variants), 290 orthologues, 18 paralogues and is associated with 12 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000049430.15	Galnt18-201	2575	622aa	ENSMUSP00000043636.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS21751	Q8K1B9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000106663.2	Galnt18-202	2530	607aa	ENSMUSP00000102274.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q59J91	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Gene: Galnt18 ENSMUSG00000038296

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Gene: Galnt18 ENSMUSG00000038296

Summary

About Us

Get help

Our sister sites

Follow us