Gene: Pate4 ENSMUSG00000032099

Description

prostate and testis expressed 4 [Source:MGI Symbol;Acc:MGI:1930790]

Gene Synonyms

9530004K16Rik, Pate-B, SVS VII, Svs7

Location

GRCm39:CM001002.3

About this gene

This gene has 1 transcript (splice variant), 29 orthologues, 12 paralogues and is associated with 13 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000034610.4	Pate4-201	1072	99aa	ENSMUSP00000034610.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS22967	Q09098	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary