Gene: Ro60 ENSMUSG00000018199

Description

Ro60, Y RNA binding protein [Source:MGI Symbol;Acc:MGI:106652]

Gene Synonyms

1810007I17Rik, A530054J02Rik, SS-A/Ro, Ssa, Ssa2, Trove2

Location

Chromosome 1: 143,626,528-143,652,806 reverse strand.

GRCm39:CM000994.3

About this gene

This gene has 2 transcripts (splice variants), 197 orthologues and is associated with 11 phenotypes.

Transcripts

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Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000159879.2	Ro60-202	8738	538aa	ENSMUSP00000125623.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS15345	O08848 Q3TJ75	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000018343.10	Ro60-201	4335	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Gene: Ro60 ENSMUSG00000018199

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Gene: Ro60 ENSMUSG00000018199

Summary

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