Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PRPF40A ENSLAFG00000001613

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Description

pre-mRNA processing factor 40 homolog A [Source:HGNC Symbol;Acc:HGNC:16463]

Location

SuperContig scaffold_3: 75,467,581-75,523,596 forward strand.

loxAfr3:GL010030.1

About this gene

This gene has 3 transcripts (splice variants), 207 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSLAFT00000001614.4	PRPF40A-201	2874	957aa	ENSLAFP00000001347.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3SNW4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSLAFT00000035203.1	PRPF40A-202	2820	939aa	ENSLAFP00000018312.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3TRV4	-
ENSLAFT00000029994.1	PRPF40A-203	2298	765aa	ENSLAFP00000028828.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3ULW9	-

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Summary

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